PROJECT NAME
GOLD Project ID
Gp0009358  
Project Name
Frateuria aurantia Kondo 67, DSM 6220  
Other Names
  
Legacy ER Project ID
1714  
Legacy GOLD ID
Gi08317, Gc02155  
NCBI BioProject Name Frateuria aurantia DSM 6220
NCBI BioProject ID 64505
NCBI BioProject Accession
PRJNA64505  
NCBI Locus Tag
Fraau  
NCBI BioSample Accession
SAMN02261415  
PI Jonathan Eisen
Added By Susannah Tringe on 2010-11-05
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Carbon cycle
GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Frateuria aurantia DSM 6220 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Frateuria aurantia Kondo 67, DSM 6220
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Illumina HiSeq 2000
Library Method (MIGS-28)
one 454 PE library (7.5 kb insert size), one Illumina library  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
63  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0009358
Organism Name
Frateuria aurantia Kondo 67, DSM 6220  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Frateuria  
Genus Synonyms
  
Species
Frateuria aurantia  
Subspecies
  
Species Synonyms
  
Strain
Kondo 67, DSM 6220  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 6220  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2235  
Exemplar Name
Frateuria aurantia  
Taxon DOI
10.1601/tx.2235  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 767434
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Xanthomonadales  
NCBI Family
Rhodanobacteraceae  
NCBI Genus
Frateuria  
NCBI Species
Frateuria aurantia  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB091194
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30c  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Lilium auratium  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Plants
Metabolisms
  
Phenotypes
  
Energy Sources Organoheterotroph

 

 

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