PROJECT NAME
GOLD Project ID
Gp0009206  
Project Name
Alcanivorax dieselolei B5  
Other Names
  
Legacy ER Project ID
1752  
Legacy GOLD ID
Gi08434, Gc02436  
NCBI BioProject Name Alcanivorax dieselolei B5
NCBI BioProject ID 60443
NCBI BioProject Accession
PRJNA60443  
NCBI Locus Tag
B5T  
NCBI BioSample Accession
  
PI Zongze Shao
Added By Ioanna Pagani on 2010-11-29
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioremediation
Sequencing Center Third Institute of Oceanography, State Oceanic Administration (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Alcanivorax dieselolei B5 was characterized by the efficient degradation of alkane (C5-C36). This property makes it a good microorganism for further development towards a bioremediation tool for oil pollution in marine enviroment.   
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(23):6674 Complete genome sequence of Alcanivorax dieselolei type strain B5.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Alcanivorax genome sequencing - The Third Institute of State Oceanic Administration (SOA), China
Analysis Projects Alcanivorax dieselolei B5
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0009206
Organism Name
Alcanivorax dieselolei B5  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Alcanivorax  
Genus Synonyms
  
Species
Alcanivorax dieselolei  
Subspecies
  
Species Synonyms
  
Strain
B5, DSM 16502  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 16502  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9440  
Exemplar Name
Alcanivorax dieselolei  
Taxon DOI
10.1601/tx.9440  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 930169
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Oceanospirillales  
NCBI Family
Alcanivoracaceae  
NCBI Genus
Alcanivorax  
NCBI Species
Alcanivorax dieselolei  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Oil-contaminated  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
4-55C  
Salinity
Halophile  
pH
  
Cell Diameter
0.3-0.7um  
Cell Length
0.8-2.0um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Marine
Metabolisms Alkane degrader
Phenotypes
  
Energy Sources
  

 

 

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