PROJECT NAME
GOLD Project ID
Gp0009137  
Project Name
Acetobacterium woodii WB1, DSM 1030  
Other Names
  
Legacy ER Project ID
18424  
Legacy GOLD ID
Gi08478, Gc02124  
NCBI BioProject Name Acetobacterium woodii DSM 1030
NCBI BioProject ID 60713
NCBI BioProject Accession
PRJNA60713  
NCBI Locus Tag
AWO  
NCBI BioSample Accession
  
PI Volker Mueller
Added By Ioanna Pagani on 2010-12-07
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Acetate production
Biochemical
Sequencing Center University of Gottingen (Germany)
Collaborating Institute University of Gottingen (Germany)
Funding Agency
  
Project Description
Acetobacterium woodii is a Gram positive, motile, strict anaerobic, acetogenic bacterium, that relies on Na+ as coupling ion in bioenergetic reactions. The organism can use a wide range of substrates, such as sugars, alcohols, methoxylated aromatic acids or C1 compounds. Electrons derived from these electron donors are used in the Wood-Ljungdahl-pathway where the organism fixes CO2 and produces acetate. The pathway of CO2-fixation is coupled to energy conservation via a chemiosmotic mechanism, one enzyme that seems to be involved is the Rnf complex. The produced Na+ gradient can be used to drive ATP-synthesis or flagella rotation. The ATP synthase is a member of the F1FO class of enzymes and has an unusual hybrid rotor. Beside CO2 A. woodii can use alternative electron acceptors like the lignin degradation product caffeate.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 7(3):e33439 An ancient pathway combining carbon dioxide fixation with the generation and utilization of a sodium ion gradient for ATP synthesis.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Acetobacterium woodii WB1, DSM 1030
Analysis Projects Acetobacterium woodii WB1, DSM 1030
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
454-GS-FLX-Titanium
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
39  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0009137
Organism Name
Acetobacterium woodii WB1, DSM 1030  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Acetobacterium  
Genus Synonyms
  
Species
Acetobacterium woodii  
Subspecies
  
Species Synonyms
  
Strain
WB1, DSM 1030  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 1030  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4285  
Exemplar Name
Acetobacterium woodii  
Taxon DOI
10.1601/tx.4285  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 931626
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Eubacteriaceae  
NCBI Genus
Acetobacterium  
NCBI Species
Acetobacterium woodii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Intertidal zone  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases
  
Known Habitats Aquatic
Mud
Ponds
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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