PROJECT NAME
GOLD Project ID
Gp0008908  
Project Name
Mycoplasma hyorhinis MCLD  
Other Names
  
Legacy ER Project ID
18485  
Legacy GOLD ID
Gi08540, Gc01744  
NCBI BioProject Name Mycoplasma hyorhinis MCLD
NCBI BioProject ID 61173
NCBI BioProject Accession
PRJNA61173  
NCBI Locus Tag
SRH  
NCBI BioSample Accession
  
PI Rottem,S
Added By Ioanna Pagani on 2010-12-15
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center The Hebrew University of Jerusalem (Israel)
Collaborating Institute
  
Funding Agency
  
Project Description
Mycoplasma hyorhinis strain MCLD was isolated from the melanoma cell line LB33 mel A1. (Eur. J. Immunol. 2004. 34: 2032-2040). Mycoplasma hyorhinis is a major contaminator of cell cultures, which impinges on many aspects of biological research . Although Mycoplasmas are considered typical extracellular microorganism that are able to adhere to epithelial cells recent studies revealed that M. hyorhinis MCLD resides within host cells and strongly suggest that the interaction of this microorganisms with cell cultures may upregulate the espression of host genes  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(17):4543-4 Genome analysis of a Mycoplasma hyorhinis strain derived from a primary human melanoma cell line.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Mycoplasma hyorhinis HUB-1
Analysis Projects Mycoplasma hyorhinis MCLD
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
26  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008908
Organism Name
Mycoplasma hyorhinis MCLD  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Mycoplasma  
Genus Synonyms
  
Species
Mycoplasma hyorhinis  
Subspecies
  
Species Synonyms
  
Strain
MCLD  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 936139
NCBI Kingdom
  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Mycoplasmatales  
NCBI Family
Mycoplasmataceae  
NCBI Genus
Mycoplasma  
NCBI Species
Mycoplasma hyorhinis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Sphere-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Respiratory infection
Urogenital infection
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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