PROJECT INFORMATION
GOLD Project ID
Gp0008561  
Project Name
Lactobacillus rhamnosus K, ATCC 8530  
Other Names
  
Legacy ER Project ID
18112  
Legacy GOLD ID
Gi07945, Gc02017  
NCBI BioProject Name Lactobacillus rhamnosus ATCC 8530
NCBI BioProject ID 73355
NCBI BioProject Accession PRJNA73355
NCBI Locus Tag
LRHK  
NCBI BioSample Accession
PI Barry Ziola
Added By Ionna Pagani on 2010-10-08
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center University of Saskatchewan (Canada)
Collaborating Institute
  
Funding Agency
  
Project Description
Lactobacillus rhamnosus ATCC 8530 Genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Plant Biotechnology Institute - National Research Council Canada
Wikipedia
Database
  
Genome Publications Journal of bacteriology 194(3):726 Genome sequence of Lactobacillus rhamnosus ATCC 8530.
Other Publications
  
PROJECT COMPOSITION
Study Lactobacillus rhamnosus K, ATCC 8530
Analysis Projects Lactobacillus rhamnosus K, ATCC 8530
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0008561
Organism Name
Lactobacillus rhamnosus K, ATCC 8530  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus rhamnosus  
Subspecies
  
Species Synonyms
  
Strain
K, ATCC 8530  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 8530  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1088720
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus rhamnosus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Human airways
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?