PROJECT NAME
GOLD Project ID
Gp0008427  
Project Name
Bacteriovorax marinus SJ  
Other Names
  
Legacy ER Project ID
17529  
Legacy GOLD ID
Gi07302, Gc01493  
NCBI BioProject Name Bacteriovorax marinus SJ
NCBI BioProject ID 50431
NCBI BioProject Accession
PRJNA50431  
NCBI Locus Tag
BMS  
NCBI BioSample Accession
  
PI Parkhill
Added By Ioanna Pagani on 2010-07-19
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency Wellcome Trust Sanger Institute (United Kingdom)
Project Description
Bacteriovorax marinus SJ genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Publication
Database
  
Genome Publications The ISME journal 7(1):148-60 A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Bacteriovorax marinus SJ
Analysis Projects Bacteriovorax marinus SJ
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0008427
Organism Name
Bacteriovorax marinus SJ  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Bacteriovorax  
Genus Synonyms
  
Species
Bacteriovorax marinus  
Subspecies
  
Species Synonyms
  
Strain
SJ  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-682  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.8508  
Exemplar Name
Bacteriovorax marinus  
Taxon DOI
10.1601/tx.8508  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 862908
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Bdellovibrionales  
NCBI Family
Halobacteriovoraceae  
NCBI Genus
Halobacteriovorax  
NCBI Species
Halobacteriovorax marinus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF084854
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Parasitic  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Host
Metabolisms
  
Phenotypes Parasite
Energy Sources
  

 

 

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