PROJECT NAME
GOLD Project ID
Gp0008371  
Project Name
Simkania negevensis Z  
Other Names
  
Legacy ER Project ID
17547  
Legacy GOLD ID
Gi07323  
NCBI BioProject Name Simkania negevensis
NCBI BioProject ID 12528
NCBI BioProject Accession
PRJNA12528  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI
Added By Ioanna Pagani on 2010-07-29
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Human Pathogen
Medical
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute J. Craig Venter Institute (JCVI) (USA)
Funding Agency
  
Project Description
Intracellular penicillin-resistant bacteria linked to respiratory disease  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Single amplified genomes of proteorhodopsin-containing uncultured marine Flavobacteria, DOEM_782016
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008371
Organism Name
Simkania negevensis Z  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLAMYDIAE  
Genus
Simkania  
Genus Synonyms
  
Species
Simkania negevensis  
Subspecies
  
Species Synonyms
  
Strain
Z  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC VR-1471  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7787  
Exemplar Name
Simkania negevensis  
Taxon DOI
10.1601/tx.7787  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 331113
NCBI Kingdom
  
NCBI Phylum
Chlamydiae  
NCBI Class
Chlamydiia  
NCBI Order
Chlamydiales  
NCBI Family
Simkaniaceae  
NCBI Genus
Simkania  
NCBI Species
Simkania negevensis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Lab synthesis  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID U68460:{1-1545}
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Bronchiolitis
Pneumonia
Respiratory infection
Known Habitats Host
Wastewater
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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