PROJECT INFORMATION
GOLD Project ID
Gp0008318  
Project Name
Pyrenophora teres f. teres 0-1  
Other Names
  
Legacy ER Project ID
1164  
Legacy GOLD ID
Gi07509  
NCBI BioProject Name Pyrenophora teres f. teres 0-1
NCBI BioProject ID 50389
NCBI BioProject Accession PRJNA50389
NCBI Locus Tag
PTT  
NCBI BioSample Accession SAMN00016826
PI
Added By Ionna Pagani on 2010-08-10
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Plant Pathogen
Agricultural
Sequencing Center Murdoch University (Australia)
Massey University
Collaborating Institute
  
Funding Agency
  
Project Description
Pyrenophora teres f. teres 0-1 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Genome biology 11(11):R109 A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX022877
Experiment Title Pyrenophora teres f. teres 0-1 genome assembly
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Pyrenophora teres f. teres 0-1
Library Layout PAIRED
Library Instrument ILLUMINA_GENOME_ANALYZER
PROJECT COMPOSITION
Study Pyrenophora teres f. teres 0-1
Organism Pyrenophora teres f. teres 0-1
Analysis Projects Pyrenophora teres f. teres 0-1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008318
Organism Name
Pyrenophora teres f. teres 0-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Pyrenophora  
Genus Synonyms
  
Species
Pyrenophora teres f. teres  
Subspecies
  
Species Synonyms
  
Strain
0-1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 861557
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Dothideomycetes  
NCBI Order
Pleosporales  
NCBI Family
Pleosporaceae  
NCBI Genus
Pyrenophora  
NCBI Species
Pyrenophora teres  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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