PROJECT INFORMATION
GOLD Project ID
Gp0008298  
Project Name
Kluyveromyces wickerhamii UCD 54-210  
Other Names
  
Legacy ER Project ID
1093  
Legacy GOLD ID
Gc01521, Gi0001093  
NCBI BioProject Name Kluyveromyces wickerhamii UCD 54-210
NCBI BioProject ID 50387
NCBI BioProject Accession PRJNA50387
NCBI Locus Tag
ECK  
NCBI BioSample Accession SAMN02981270
PI
Added By Ionna Pagani on 2010-07-08
Last Modified By Supratim Mukherjee on 2017-03-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Washington University in St. Louis (USA)
Collaborating Institute University of California, San Francisco (USA)
Funding Agency
  
Project Description
ATCC strain UCD 54-210 [CBS 2745, IFO 1675, NCYC 908, NRRL Y-8286] Kluyveromyces wickerhamii is a species that branches with the emerging model organism Kluyveromyces lactis. The lab has utilized this genomic data to aid the identification of cis-regulatory sequences in the Kluyveromyces species.   
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 108(18):7493-8 Extensive DNA-binding specificity divergence of a conserved transcription regulator.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Kluyveromyces wickerhamii UCD 54-210
Organism Kluyveromyces wickerhamii UCD 54-210
Analysis Projects Kluyveromyces wickerhamii UCD 54-210
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008298
Organism Name
Kluyveromyces wickerhamii UCD 54-210  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Kluyveromyces  
Genus Synonyms
  
Species
Kluyveromyces wickerhamii  
Subspecies
  
Species Synonyms
  
Strain
UCD 54-210  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 861556
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Saccharomycetes  
NCBI Order
Saccharomycetales  
NCBI Family
Saccharomycetaceae  
NCBI Genus
Kluyveromyces  
NCBI Species
Kluyveromyces wickerhamii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?