PROJECT NAME
GOLD Project ID
Gp0008296  
Project Name
Desulfosarcina variabilis Montpellier  
Other Names
  
Legacy ER Project ID
17507  
Legacy GOLD ID
Gi07281  
NCBI BioProject Name Desulfosarcina variabilis str. Montpellier
NCBI BioProject ID 50095
NCBI BioProject Accession
PRJNA50095  
NCBI Locus Tag
DSM2060  
NCBI BioSample Accession
  
PI Muyzer G
Added By Ioanna Pagani on 2010-07-08
Last Modified By Ioanna Pagani on 2010-07-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Environmental
Marine Microbial Initiative (MMI)
Sequencing Center
  
Collaborating Institute Gordon and Betty Moore Foundation Marine Microbiology Initiative (USA)
Funding Agency
  
Project Description
Desulfosarcina variabilis str. Montpellier genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Desulfosarcina variabilis Montpellier
Analysis Projects Desulfosarcina variabilis Montpellier
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
51  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0008296
Organism Name
Desulfosarcina variabilis Montpellier  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfosarcina  
Genus Synonyms
  
Species
Desulfosarcina variabilis  
Subspecies
  
Species Synonyms
  
Strain
Montpellier, DSM 2060  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 2060  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3586  
Exemplar Name
Desulfosarcina variabilis  
Taxon DOI
10.1601/tx.3586  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 859321
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfobacterales  
NCBI Family
Desulfobacteraceae  
NCBI Genus
Desulfosarcina  
NCBI Species
Desulfosarcina variabilis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Mud
Metabolisms Sulfate reducer
Phenotypes
  
Energy Sources
  

 

 

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