PROJECT INFORMATION
GOLD Project ID
Gp0008280  
Project Name
Salmonella enterica enterica sv. Typhimurium SL1344  
Other Names
  
Legacy ER Project ID
17522  
Legacy GOLD ID
Gc01490  
NCBI BioProject Name Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
NCBI BioProject ID 50407
NCBI BioProject Accession PRJNA50407
NCBI Locus Tag
SL1344  
NCBI BioSample Accession
PI Parkhill
Added By Ionna Pagani on 2010-07-19
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency Wellcome Trust Sanger Institute (United Kingdom)
Project Description
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 109(20):E1277-86 The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.
Other Publications
  
PROJECT COMPOSITION
Study Salmonella enterica enterica sv Typhimurium SL1344
Analysis Projects Salmonella enterica enterica sv. Typhimurium SL1344
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0008280
Organism Name
Salmonella enterica enterica sv. Typhimurium SL1344  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Salmonella  
Genus Synonyms
  
Species
Salmonella enterica  
Subspecies
enterica  
Species Synonyms
  
Strain
SL1344  
Strain Synonyms
  
Serovar-Biovar
Typhimurium  
Culture Collection ID
CCUG 51871  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 216597
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Salmonella  
NCBI Species
Salmonella enterica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases Gastroenteritis
Salmonellosis
Food poisoning
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

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