PROJECT NAME
GOLD Project ID
Gp0007999  
Project Name
Desulfosporosinus youngiae JW/YJL-B18, DSM 17734  
Other Names
  
Legacy ER Project ID
17792  
Legacy GOLD ID
Gi07596  
NCBI BioProject Name Desulfosporosinus youngiae DSM 17734
NCBI BioProject ID 60451
NCBI BioProject Accession
PRJNA60451  
NCBI Locus Tag
Desyo  
NCBI BioSample Accession
SAMN02261386  
PI Alexander Loy
Added By Ioanna Pagani on 2010-09-02 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biodegradation of pollutants
Bioremediation
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Vienna (Austria)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Desulfosporosinus youngiae DSM 17734 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(22):6300-1 Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Comparative genomics of Desulfosporosinus species - Insights into the evolution and genetic blueprints of sulfate-reducing bacteria involved in wetland carbon cycling and heavy metal bioremediation
Analysis Projects Desulfosporosinus youngiae JW/YJL-B18, DSM 17734
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 5: Non-contiguous Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
44  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007999
Organism Name
Desulfosporosinus youngiae JW/YJL-B18, DSM 17734  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Desulfosporosinus  
Genus Synonyms
  
Species
Desulfosporosinus youngiae  
Subspecies
  
Species Synonyms
  
Strain
JW/YJL-B18, DSM 17734  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17734  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14839  
Exemplar Name
Desulfosporosinus youngiae  
Taxon DOI
10.1601/tx.14839  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 768710
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Peptococcaceae  
NCBI Genus
Desulfosporosinus  
NCBI Species
Desulfosporosinus youngiae  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Wetlands  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
35C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sediment
Wetland
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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