PROJECT INFORMATION
GOLD Project ID
Gp0007978  
Project Name
Desulfobacter postgatei 2ac9  
Other Names
  
Legacy ER Project ID
17789  
Legacy GOLD ID
Gi07592  
NCBI BioProject Name Desulfobacter postgatei 2ac9
NCBI BioProject Accession PRJNA59797
NCBI Locus Tag
Despo  
NCBI BioSample Accession SAMN02261381
PI Derek Lovley
Added By Ionna Pagani on 2010-09-02
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Biotechnological
Bioremediation
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Massachusetts, Amherst
Association Nationale Recherche Technologie (France)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Desulfobacter postgatei 2ac9 genome sequencing project  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Single Isolate (Lovley) DNA Sequencing
Organism Desulfobacter postgatei 2ac9
Analysis Projects Desulfobacter postgatei 2ac9
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina GAIIx
454 GS FLX Titanium
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007978
Organism Name
Desulfobacter postgatei 2ac9  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfobacter  
Genus Synonyms
  
Species
Desulfobacter postgatei  
Subspecies
  
Species Synonyms
  
Strain
2ac9  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 33911  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3541  
Exemplar Name
Desulfobacter postgatei  
Taxon DOI
10.1601/tx.3541  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 879212
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfobacterales  
NCBI Family
Desulfobacteraceae  
NCBI Genus
Desulfobacter  
NCBI Species
Desulfobacter postgatei  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Sediment
Aquatic
Brackish water
Metabolisms
  
Phenotypes
  
Energy Sources Lithoautotroph

 

 

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