PROJECT NAME
GOLD Project ID
Gp0007946  
Project Name
Saccharomonospora halophila 8  
Other Names
  
Legacy ER Project ID
17765  
Legacy GOLD ID
Gi07585  
NCBI BioProject Name Saccharomonospora halophila 8
NCBI BioProject ID 72359
NCBI BioProject Accession
PRJNA72359  
NCBI Locus Tag
Sacha  
NCBI BioSample Accession
SAMN02256397  
PI Hans-Peter Klenk
Added By Ioanna Pagani on 2010-09-02
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Bioenergy
Comparative analysis
Evolution
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Saccharomonospora halophila 8 Genome Sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Whole genome type strain sequences of the genus Saccharomonospora - a taxonomically troubled genus with bioenergetic potential
Analysis Projects Saccharomonospora halophila 8
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
71  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007946
Organism Name
Saccharomonospora halophila 8  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Saccharomonospora  
Genus Synonyms
  
Species
Saccharomonospora halophila  
Subspecies
  
Species Synonyms
  
Strain
8  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 44411  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.6751  
Exemplar Name
Saccharomonospora halophila  
Taxon DOI
10.1601/tx.6751  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 928729
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Pseudonocardiales  
NCBI Family
Pseudonocardiaceae  
NCBI Genus
Saccharomonospora  
NCBI Species
Saccharomonospora halophila  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Intertidal zone  
Specific Ecosystem
Salt marsh  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
28C  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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