PROJECT NAME
GOLD Project ID
Gp0007747  
Project Name
Rubinisphaera brasiliensis DSM 5305  
Other Names
Planctomyces brasiliensis DSM 5305  
Legacy ER Project ID
16988  
Legacy GOLD ID
Gi06613, Gc01674  
NCBI BioProject Name Planctomyces brasiliensis DSM 5305
NCBI BioProject ID 47863
NCBI BioProject Accession PRJNA47863
NCBI Locus Tag
Plabr  
NCBI BioSample Accession SAMN00103628
PI Jonathan Eisen
Added By Nikos Kyrpides on 2010-04-16
Last Modified By Supratim Mukherjee on 2017-03-10
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Tree of Life
GEBA
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Leibniz Institute (Germany)
Project Description
Planctomyces brasiliensis DSM 5305 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Wikipedia
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Rubinisphaera brasiliensis DSM 5305
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAii
454-GS-FLX-Titanium
Library Method (MIGS-28)
GTHA, GTHT single random genomic  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0007747
Organism Name
Rubinisphaera brasiliensis DSM 5305  
Other names (alias, synonyms, short names, common names)
Planctomyces brasiliensis IFAM 1448, DSM 5305  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
Rubinisphaera  
Genus Synonyms
Planctomyces  
Species
Rubinisphaera brasiliensis  
Subspecies
  
Species Synonyms
  
Strain
DSM 5305  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 49424  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7750  
Exemplar Name
Planctomyces brasiliensis  
Taxon DOI
10.1601/tx.7750  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 756272
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Planctomycetia  
NCBI Order
Planctomycetales  
NCBI Family
Planctomycetaceae  
NCBI Genus
Rubinisphaera  
NCBI Species
Rubinisphaera brasiliensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Sphere-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
27 - 35  
Salinity
Halotolerant  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Saline water
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?