PROJECT NAME
GOLD Project ID
Gp0007747  
Project Name
Planctomyces brasiliensis DSM 5305  
Other Names
Planctomyces brasiliensis IFAM 1448  
Legacy ER Project ID
16988  
Legacy GOLD ID
Gi06613, Gc01674  
NCBI BioProject Name Planctomyces brasiliensis DSM 5305
NCBI BioProject ID 47863
NCBI BioProject Accession
PRJNA47863  
NCBI Locus Tag
Plabr  
NCBI BioSample Accession
SAMN00103628  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2010-04-16
Last Modified By Michelle Isbandi on 2015-05-29
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Planctomyces brasiliensis DSM 5305 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Wikipedia
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Planctomyces brasiliensis DSM 5305
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Library Method (MIGS-28)
GTHA, GTHT single random genomic  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0007747
Organism Name
Planctomyces brasiliensis IFAM 1448, DSM 5305  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
Planctomyces  
Genus Synonyms
  
Species
Planctomyces brasiliensis  
Subspecies
  
Species Synonyms
  
Strain
IFAM 1448, DSM 5305  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 49424  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7750  
Exemplar Name
Planctomyces brasiliensis  
Taxon DOI
10.1601/tx.7750  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 756272
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Planctomycetia  
NCBI Order
Planctomycetales  
NCBI Family
Planctomycetaceae  
NCBI Genus
Rubinisphaera  
NCBI Species
Rubinisphaera brasiliensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Sphere-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
27 - 35  
Salinity
Halotolerant  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Saline water
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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