PROJECT INFORMATION
GOLD Project ID
Gp0007470  
Project Name
Thiocystis violascens 611, DSM 198  
Other Names
  
Legacy ER Project ID
17241  
Legacy GOLD ID
Gi06849, Gc02350  
NCBI BioProject Name Thiocystis violascens DSM 198
NCBI BioProject ID 60641
NCBI BioProject Accession PRJNA60641
NCBI Locus Tag
Thivi  
NCBI BioSample Accession SAMN02232062
PI Donald Bryant
Added By Nikos Kyrpides on 2010-05-31
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Bioremediation
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Thiocystis violascens DSM 198 genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Genome sequencing of representative photosynthetic purple sulfur bacteria
Analysis Projects Thiocystis violascens 611, DSM 198
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
63  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007470
Organism Name
Thiocystis violascens 611, DSM 198  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Thiocystis  
Genus Synonyms
  
Species
Thiocystis violascens  
Subspecies
  
Species Synonyms
  
Strain
6111, DSM 198  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 198  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2082  
Exemplar Name
Thiocystis violascens  
Taxon DOI
10.1601/tx.2136  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 765911
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Chromatiales  
NCBI Family
Chromatiaceae  
NCBI Genus
Thiocystis  
NCBI Species
Thiocystis violascens  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Ponds
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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