PROJECT NAME
GOLD Project ID
Gp0007269  
Project Name
Brenneria salicis Dye EX2, ATCC 15712  
Other Names
  
Legacy ER Project ID
1022  
Legacy GOLD ID
Gi06988  
NCBI BioProject Name Brenneria salicis ATCC 15712
NCBI BioProject ID 49649
NCBI BioProject Accession
PRJNA49649  
NCBI Locus Tag
Bresa  
NCBI BioSample Accession
SAMN00716786  
PI Perna, Nicole T
Added By Nikos Kyrpides on 2010-06-13
Last Modified By Ioanna Pagani on 2011-09-21
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Agricultural
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Brenneria salicis ATCC 15712 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Phytopathogenic Enterobacteria
Analysis Projects Brenneria salicis Dye EX2, ATCC 15712
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007269
Organism Name
Brenneria salicis Dye EX2, ATCC 15712  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Brenneria  
Genus Synonyms
  
Species
Brenneria salicis  
Subspecies
  
Species Synonyms
  
Strain
Dye EX2 ,ATCC 15712  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 15712  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3194  
Exemplar Name
Brenneria salicis  
Taxon DOI
10.1601/tx.3106  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 714314
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Brenneria  
NCBI Species
Brenneria salicis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25C  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Plants
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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