PROJECT NAME
GOLD Project ID
Gp0007241  
Project Name
Pseudomonas fulva 12-X  
Other Names
  
Legacy ER Project ID
1034  
Legacy GOLD ID
Gi07072, Gc02116  
NCBI BioProject Name Pseudomonas fulva 12-X
NCBI BioProject ID 49675
NCBI BioProject Accession
PRJNA49675  
NCBI Locus Tag
Psefu  
NCBI BioSample Accession
SAMN00713619  
PI John Gladden
Added By Martin Allgaier on 2010-06-23
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioenergy
Biofuels
Biomass conversion
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute DOE Joint Bioenergy Institute (JBEI) (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Pseudomonas fulva 12-X genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Compost Feedstock-Adapted Isolates
Analysis Projects Pseudomonas fulva 12-X
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
454 Paired-end  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0007241
Organism Name
Pseudomonas fulva 12-X  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas fulva  
Subspecies
  
Species Synonyms
  
Strain
12-X  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 743720
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas fulva  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Agricultural field  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Bacteremia
Known Habitats Host
Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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