PROJECT INFORMATION
GOLD Project ID
Gp0007142  
Project Name
Salmonella enterica enterica sv. Typhimurium T000240  
Other Names
  
Legacy ER Project ID
16714  
Legacy GOLD ID
Gi06189, Gc01846  
NCBI BioProject Name Salmonella enterica subsp. enterica serovar Typhimurium str. T000240
NCBI BioProject ID 45951
NCBI BioProject Accession PRJNA45951
NCBI Locus Tag
STMDT12  
NCBI BioSample Accession SAMD00000683
PI
Added By Nikos Kyrpides on 2010-02-17
Last Modified By Supratim Mukherjee on 2017-10-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
fluoroquinolone-resistant  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Antimicrobial agents and chemotherapy 55(2):623-30 Whole-genome analysis of Salmonella enterica serovar Typhimurium T000240 reveals the acquisition of a genomic island involved in multidrug resistance via IS1 derivatives on the chromosome.
Other Publications
  
PROJECT COMPOSITION
Study Salmonella enterica enterica sv Typhimurium T000240
Analysis Projects Salmonella enterica enterica sv. Typhimurium T000240
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0007142
Organism Name
Salmonella enterica enterica sv. Typhimurium T000240  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Salmonella  
Genus Synonyms
  
Species
Salmonella enterica  
Subspecies
enterica  
Species Synonyms
  
Strain
T000240  
Strain Synonyms
  
Serovar-Biovar
Typhimurium  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 718274
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Salmonella  
NCBI Species
Salmonella enterica  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases Gastroenteritis
Salmonellosis
Food poisoning
Known Habitats Soil
Host
Food
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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