PROJECT INFORMATION | |
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GOLD Project ID
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Gp0007112
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Project Name
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Natrialba hulunbeirensis JCM 10989
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Other Names
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Legacy ER Project ID
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16682
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Legacy GOLD ID
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Gi06156
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NCBI BioProject Name | Natrialba hulunbeirensis JCM 10989 |
NCBI BioProject ID
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174932 |
NCBI BioProject Accession
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PRJNA174932 |
NCBI Locus Tag
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C483
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NCBI BioSample Accession
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SAMN02471673 |
PI | Marc T. Facciotti |
Added By |
Nikos Kyrpides
on 2010-02-15 |
Last Modified By |
Hema Katta
on 2019-03-06 |
Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Tree of Life Biotechnological |
Sequencing Center
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University of California, Davis
(USA)
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Collaborating Institute
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Funding Agency
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National Science Foundation (NSF)
(USA)
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Project Description
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phylogenomics of halophilic archaea
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Is JGI Project |
No
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
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EXTERNAL PROJECT LINKS | |
Project Information
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Database
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Genome Publications
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International Journal of Systematic and Evolutionary Microbiology
51(Pt 5):1693-8
Natrialba hulunbeirensis sp. nov. and Natrialba chahannaoensis sp. nov., novel haloalkaliphilic archaea from soda lakes in Inner Mongolia Autonomous Region, China.
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Other Publications
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SRA Experiment |
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PROJECT COMPOSITION | |
Study |
Natrialba hulunbeirensis JCM 10989 |
Organism |
Natrialba hulunbeirensis JCM 10989 |
Analysis Projects |
Natrialba hulunbeirensis JCM 10989 |
Number of Analysis Projects (AP) |
1 |
Number of Derived Analyis Projects (DAP) |
0
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SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 1: Standard Draft |
Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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Illumina GAIIx Illumina HiSeq 2000 |
Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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GC Percent |
62
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Chromosome Count |
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Plasmid Count |
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ORGANISM NAME | |
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GOLD Organism ID |
Go0007112 |
Organism Name |
Natrialba hulunbeirensis JCM 10989
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
ARCHAEAL
|
Phylogeny |
EURYARCHAEOTA-HALOBACTERIA
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Genus |
Natrialba
|
Genus Synonyms |
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Species |
Natrialba hulunbeirensis
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Subspecies |
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Species Synonyms |
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Strain |
JCM 10989
|
Strain Synonyms |
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Serovar/Cultivar |
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Culture Collection ID |
JCM 10989
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.337
|
Exemplar Name |
Natrialba hulunbeirensis
|
Taxon DOI |
10.1601/tx.337
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
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ORGANISM TAXONOMY
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NCBI Taxonomy ID |
1227493 |
NCBI Superkingdom |
Archaea
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NCBI Kingdom |
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NCBI Phylum |
Euryarchaeota
|
NCBI Class |
Halobacteria
|
NCBI Order |
Natrialbales
|
NCBI Family |
Natrialbaceae
|
NCBI Genus |
Natrialba
|
NCBI Species |
Natrialba hulunbeirensis
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ISOLATION CLASSIFICATION | |
Ecosystem |
Environmental
|
Ecosystem Category |
Aquatic
|
Ecosystem Type |
Non-marine Saline and Alkaline
|
Ecosystem Subtype |
Alkaline
|
Specific Ecosystem |
Sediment
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
AF262026 |
GENERAL PROPERTIES | |
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Oxygen Requirement |
Aerobe
|
Cell Shape |
Rod-shaped
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Motility |
Nonmotile
|
Sporulation |
|
Temperature Range |
Mesophile
|
Salinity |
Halophile
|
pH |
9
|
Cell Diameter |
0.4 - 0.6 um
|
Cell Length |
1.0 - 2.5 um
|
Color |
Red
|
Gram Staining |
Gram-
|
Biotic Relationships |
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Symbiotic Physical Interaction |
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Symbiotic Relationship |
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Symbiont Name |
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Symbiont Taxon ID |
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Cell Arrangements |
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Diseases |
None |
Known Habitats |
Sediment Aquatic Fresh water |
Metabolisms |
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Phenotypes |
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Energy Sources |
Chemoorganotroph |
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