PROJECT NAME
GOLD Project ID
Gp0007106  
Project Name
Halobiforma lacisalsi AJ5, JCM 12983  
Other Names
  
Legacy ER Project ID
16628  
Legacy GOLD ID
Gi06102  
NCBI BioProject Name Halobiforma lacisalsi AJ5
NCBI BioProject ID 174894
NCBI BioProject Accession
PRJNA174894  
NCBI Locus Tag
C445  
NCBI BioSample Accession
SAMN02471659  
PI Marc T. Facciotti
Added By Nikos Kyrpides on 2010-02-12
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biotechnological
Tree of Life
Sequencing Center University of California, Davis (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
phylogenomics of halophilic archaea  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Halobiforma lacisalsi AJ5, JCM 12983
Analysis Projects Halobiforma lacisalsi AJ5, JCM 12983
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAiix
Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
65  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0002302
Organism Name
Halobiforma lacisalsi AJ5, JCM 12983  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halobiforma  
Genus Synonyms
  
Species
Halobiforma lacisalsi  
Subspecies
  
Species Synonyms
  
Strain
AJ5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CGMCC 1.3738  
Type Strain
Unknown  
Exemplar DOI
10.1601/ex.9565  
Exemplar Name
Halobiforma lacisalsi  
Taxon DOI
10.1601/tx.9565  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 358396
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Natrialbales  
NCBI Family
Natrialbaceae  
NCBI Genus
Halobiforma  
NCBI Species
Halobiforma lacisalsi  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY277582
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes Neutrophilic
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?