PROJECT NAME
GOLD Project ID
Gp0007080  
Project Name
Halorubrum lipolyticum DSM 21995  
Other Names
  
Legacy ER Project ID
16660  
Legacy GOLD ID
Gi06134  
NCBI BioProject Name Halorubrum lipolyticum DSM 21995
NCBI BioProject ID 174918
NCBI BioProject Accession
PRJNA174918  
NCBI Locus Tag
C469  
NCBI BioSample Accession
SAMN02471632  
PI Marc T. Facciotti
Added By Nikos Kyrpides on 2010-02-13
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biotechnological
Tree of Life
Sequencing Center University of California, Davis (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
phylogenomics of halophilic archaea  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Halorubrum lipolyticum DSM 21995
Analysis Projects Halorubrum lipolyticum DSM 21995
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAiix
Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
68  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0007080
Organism Name
Halorubrum lipolyticum DSM 21995  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halorubrum  
Genus Synonyms
  
Species
Halorubrum lipolyticum  
Subspecies
  
Species Synonyms
  
Strain
DSM 21995  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 21995  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10139  
Exemplar Name
Halorubrum lipolyticum  
Taxon DOI
10.1601/tx.10139  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 368624
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Haloferacales  
NCBI Family
Haloferacaceae  
NCBI Genus
Halorubrum  
NCBI Species
Halorubrum lipolyticum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Feces
Gastrointestinal tract
Host
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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