PROJECT INFORMATION
GOLD Project ID
Gp0006983  
Project Name
Campylobacter jejuni jejuni S3  
Other Names
  
Legacy ER Project ID
16715  
Legacy GOLD ID
Gi06190, Gc01564  
NCBI BioProject Name Campylobacter jejuni subsp. jejuni S3
NCBI BioProject ID 45947
NCBI BioProject Accession PRJNA45947
NCBI Locus Tag
CJS3  
NCBI BioSample Accession
PI Cooper,K.K
Added By Nikos Kyrpides on 2010-02-17
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Poultry
Animal Pathogen
Medical
Sequencing Center University of Arizona (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
This is a poultry isolate that was originally isolated from the feces of a chicken, and has been shown to be non-invasive to weakly invasive in vitro. In addition, it has been found to be non-motile and originally was an effective colonizer of poultry; however after minimal passage in the laboratory it no longer colonizes poultry.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(6):1491-2 Complete genome sequence of Campylobacter jejuni strain S3.
Other Publications
  
PROJECT COMPOSITION
Study Campylobacter jejuni jejuni S3
Analysis Projects Campylobacter jejuni jejuni S3
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
30  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0006983
Organism Name
Campylobacter jejuni jejuni S3  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-EPSILON  
Genus
Campylobacter  
Genus Synonyms
  
Species
Campylobacter jejuni  
Subspecies
jejuni  
Species Synonyms
  
Strain
S3  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 718271
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Epsilonproteobacteria  
NCBI Order
Campylobacterales  
NCBI Family
Campylobacteraceae  
NCBI Genus
Campylobacter  
NCBI Species
Campylobacter jejuni  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Fecal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Spiral-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Chains
Diseases Food poisoning
Known Habitats Birds intestinal microflora
Host
Gastrointestinal tract
Feces
Wastewater
Metabolisms
  
Phenotypes Food poisoning
Pathogen
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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