PROJECT NAME
GOLD Project ID
Gp0006880  
Project Name
Arthrospira platensis NIES-39  
Other Names
  
Legacy ER Project ID
16850  
Legacy GOLD ID
Gi06327, Gc01468  
NCBI BioProject Name Arthrospira platensis NIES-39
NCBI BioProject ID 42161
NCBI BioProject Accession
PRJDA42161  
NCBI Locus Tag
NIES39  
NCBI BioSample Accession
  
PI Nobuyuki Fujita
Added By Nikos Kyrpides on 2010-02-25
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Dietary supplement
Food industry
Vitamin production
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute University of Tokyo (Switzerland)
Funding Agency
  
Project Description
Arthrospira platensis NIES-39 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications DNA research : an international journal for rapid publication of reports on genes and genomes 17(2):85-103 Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39.
Other Publications
  
PROJECT COMPOSITION
Studies Arthrospira platensis NIES-39
Analysis Projects Arthrospira platensis NIES-39
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
1.5- and 5-kb inserts, 40kb fosmids  
Number Of Reads
  
Read Size
  
Vector
pUC118, pCC1FOS  
GC Percent
44  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0006880
Organism Name
Arthrospira platensis NIES-39  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Arthrospira  
Genus Synonyms
Spirulina  
Species
Arthrospira platensis  
Subspecies
  
Species Synonyms
  
Strain
NIES-39  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NIES-39  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 696747
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Oscillatoriales  
NCBI Family
Microcoleaceae  
NCBI Genus
Arthrospira  
NCBI Species
Arthrospira platensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Saline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Filaments
Diseases None
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes Photosynthetic
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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