PROJECT INFORMATION
GOLD Project ID
Gp0006809  
Project Name
Halovivax ruber XH-70, DSM 18193  
Other Names
  
Legacy ER Project ID
587  
Legacy GOLD ID
Gi05998, Gc0000587  
NCBI BioProject Name Halovivax ruber XH-70
NCBI BioProject ID 59897
NCBI BioProject Accession PRJNA59897
NCBI Locus Tag
Halru  
NCBI BioSample Accession SAMN02232030
PI Iain Anderson
Added By Nikos Kyrpides on 2010-02-04
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Halovivax ruber XH-70 genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Completing the genomic survey of haloarchaeal genomes (revised), part 2
Analysis Projects Halovivax ruber XH-70, DSM 18193
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0006809
Organism Name
Halovivax ruber XH-70, DSM 18193  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halovivax  
Genus Synonyms
  
Species
Halovivax ruber  
Subspecies
  
Species Synonyms
  
Strain
XH-70, DSM 18193  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 18193  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10779  
Exemplar Name
Halovivax ruber  
Taxon DOI
10.1601/tx.10779  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 797302
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Natrialbales  
NCBI Family
Natrialbaceae  
NCBI Genus
Halovivax  
NCBI Species
Halovivax ruber  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Hypersaline  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AM269467
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Pleomorphic-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
Halophile  
pH
6.0-9.0  
Cell Diameter
  
Cell Length
  
Color
Red  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Fresh water
Saline water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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