PROJECT NAME
GOLD Project ID
Gp0006720  
Project Name
Methylocella silvestris BL2, DSM 15510  
Other Names
  
Legacy ER Project ID
12164  
Legacy GOLD ID
Gi01549, Gc00900  
NCBI BioProject Name Methylocella silvestris BL2
NCBI BioProject ID 20635
NCBI BioProject Accession
PRJNA20635  
NCBI Locus Tag
MsilDRAFT  
NCBI BioSample Accession
SAMN00000045  
PI Peter Dunfield
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Facultative methanotroph  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Information
Database
  
Genome Publications Journal of bacteriology 192(14):3840-1 Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Obligate methanotrophy CSP_777358
Analysis Projects Methylocella silvestris BL2, DSM 15510
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Solexa
Library Method (MIGS-28)
454 Paired-end  
Number Of Reads
38459  
Read Size
  
Vector
  
GC Percent
63  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0006720
Organism Name
Methylocella silvestris BL2, DSM 15510  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Methylocella  
Genus Synonyms
  
Species
Methylocella silvestris  
Subspecies
  
Species Synonyms
  
Strain
BL2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 15510  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1457  
Exemplar Name
Methylocella silvestris  
Taxon DOI
10.1601/tx.1457  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 395965
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Beijerinckiaceae  
NCBI Genus
Methylocella  
NCBI Species
Methylocella silvestris  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 371336
Genbank 16S ID AJ491847
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Psychrotolerant  
Temperature Optimum
11 - 49  
Salinity
  
pH
4.5 - 7  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms Methane oxidation
Phenotypes Acidophile
Energy Sources Methylotroph

 

 

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