PROJECT NAME
GOLD Project ID
Gp0006719  
Project Name
Sulfurihydrogenibium yellowstonense SS-5  
Other Names
  
Legacy ER Project ID
11985  
Legacy GOLD ID
Gi01958  
NCBI BioProject Name Sulfurihydrogenibium yellowstonense SS-5
NCBI BioProject ID 19071
NCBI BioProject Accession
PRJNA19071  
NCBI Locus Tag
SULYE  
NCBI BioSample Accession
SAMN02436268  
PI anna-louise reysenbach
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biotechnological
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute Portland State University
Funding Agency National Science Foundation (NSF) (USA)
Project Description
A thermophilic sulfur-oxidizing bacteria from the Calcite Hot Springs in Yellowstone National Park  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Entrez
Taxonomy
Aquificales Data Warehouse
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Sulfurihydrogenibium yellowstonense SS-5
Analysis Projects Sulfurihydrogenibium yellowstonense SS-5
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
33  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006719
Organism Name
Sulfurihydrogenibium yellowstonense SS-5  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
AQUIFICAE  
Genus
Sulfurihydrogenibium  
Genus Synonyms
  
Species
Sulfurihydrogenibium yellowstonense  
Subspecies
  
Species Synonyms
  
Strain
SS-5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 12773  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9748  
Exemplar Name
Sulfurihydrogenibium yellowstonense  
Taxon DOI
10.1601/tx.9748  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 432331
NCBI Kingdom
  
NCBI Phylum
Aquificae  
NCBI Class
Aquificae  
NCBI Order
Aquificales  
NCBI Family
Hydrogenothermaceae  
NCBI Genus
Sulfurihydrogenibium  
NCBI Species
Sulfurihydrogenibium yellowstonense  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY686713
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
70  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Fresh water
Hot spring
Metabolisms Sulfur oxidizer
Phenotypes
  
Energy Sources Heterotroph

 

 

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