PROJECT NAME
GOLD Project ID
Gp0006700  
Project Name
Staphylococcus lugdunensis HKU09-01  
Other Names
  
Legacy ER Project ID
16352  
Legacy GOLD ID
Gi05795, Gc01167  
NCBI BioProject Name Staphylococcus lugdunensis HKU09-01
NCBI BioProject ID 42395
NCBI BioProject Accession
PRJNA42395  
NCBI Locus Tag
SLGD  
NCBI BioSample Accession
  
PI Kwok Yung Yuen
Added By Nikos Kyrpides on 2010-01-01
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center
  
Collaborating Institute University of Hong Kong (Hong Kong)
Funding Agency
  
Project Description
pathogenic member of the coagulase-negative staphylococci, causing skin and soft tissue infections, catheter-related bacteremia, native valve endocardititis and osteomyelitis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 192(5):1471-2 Complete genome sequence of Staphylococcus lugdunensis strain HKU09-01.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Staphylococcus lugdunensis HKU09-01
Analysis Projects Staphylococcus lugdunensis HKU09-01
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
34  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0006700
Organism Name
Staphylococcus lugdunensis HKU09-01  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Staphylococcus  
Genus Synonyms
  
Species
Staphylococcus lugdunensis  
Subspecies
  
Species Synonyms
  
Strain
HKU09-01  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 698737
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Staphylococcaceae  
NCBI Genus
Staphylococcus  
NCBI Species
Staphylococcus lugdunensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30 - 37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Clusters
Pairs
Singles
Diseases
  
Known Habitats Host
Human vaginal microflora
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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