PROJECT NAME
GOLD Project ID
Gp0006654  
Project Name
Spirochaeta alkalica DSM 8900  
Other Names
  
Legacy ER Project ID
16396  
Legacy GOLD ID
Gi05837  
NCBI BioProject Name Spirochaeta alkalica DSM 8900
NCBI BioProject ID 169743
NCBI BioProject Accession
PRJNA169743  
NCBI Locus Tag
B071  
NCBI BioSample Accession
SAMN02440429  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2010-01-03
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
A Genomic Encyclopedia of Bacteria and Archaea (GEBA)  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Spirochaeta alkalica DSM 8900
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006654
Organism Name
Spirochaeta alkalica DSM 8900  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SPIROCHAETES  
Genus
Spirochaeta  
Genus Synonyms
  
Species
Spirochaeta alkalica  
Subspecies
  
Species Synonyms
  
Strain
DSM 8900  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 8900  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7800  
Exemplar Name
Spirochaeta alkalica  
Taxon DOI
10.1601/tx.7800  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 942938
NCBI Kingdom
  
NCBI Phylum
Spirochaetes  
NCBI Class
Spirochaetia  
NCBI Order
Spirochaetales  
NCBI Family
Spirochaetaceae  
NCBI Genus
Spirochaeta  
NCBI Species
Spirochaeta alkalica  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID X93927
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Soda lakes
Metabolisms Cellobiose-degrading
Phenotypes
  
Energy Sources
  

 

 

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