PROJECT NAME
GOLD Project ID
Gp0006429  
Project Name
Shewanella baltica OS117  
Other Names
  
Legacy ER Project ID
16514  
Legacy GOLD ID
Gi05974, Gc01803  
NCBI BioProject Name Shewanella baltica OS117
NCBI BioProject ID 49451
NCBI BioProject Accession
PRJNA49451  
NCBI Locus Tag
Sbal117  
NCBI BioSample Accession
SAMN00713637  
PI Auchtung, Jennifer
Added By Nikos Kyrpides on 2010-01-31
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Shewanella baltica OS117 genome sequencing project.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(5):1236 Genome sequencing of five Shewanella baltica strains recovered from the oxic-anoxic interface of the Baltic Sea.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Understanding the role of population microdiversity in adaptation to environmental redox gradients
Analysis Projects Shewanella baltica OS117
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
46  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0006429
Organism Name
Shewanella baltica OS117  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Shewanella  
Genus Synonyms
  
Species
Shewanella baltica  
Subspecies
  
Species Synonyms
  
Strain
OS117  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 693970
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Alteromonadales  
NCBI Family
Shewanellaceae  
NCBI Genus
Shewanella  
NCBI Species
Shewanella baltica  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
4  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats Aquatic
Marine
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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