PROJECT NAME
GOLD Project ID
Gp0006401  
Project Name
Helicobacter pylori 52  
Other Names
  
Legacy ER Project ID
16429  
Legacy GOLD ID
Gc01181  
NCBI BioProject Name Helicobacter pylori 52
NCBI BioProject ID 39507
NCBI BioProject Accession
PRJNA39507  
NCBI Locus Tag
HPKB  
NCBI BioSample Accession
  
PI
Added By Nikos Kyrpides on 2010-01-14
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center
  
Collaborating Institute Gyeongsang National University (South Korea)
Funding Agency
  
Project Description
Helicobacter pylori 52 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Helicobacter pylori 52
Analysis Projects Helicobacter pylori 52
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
39  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006401
Organism Name
Helicobacter pylori 52  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-EPSILON  
Genus
Helicobacter  
Genus Synonyms
  
Species
Helicobacter pylori  
Subspecies
  
Species Synonyms
  
Strain
52  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 684950
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Epsilonproteobacteria  
NCBI Order
Campylobacterales  
NCBI Family
Helicobacteraceae  
NCBI Genus
Helicobacter  
NCBI Species
Helicobacter pylori  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Gastric inflammation
Ulcer
Known Habitats Host
Human stomach
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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