PROJECT INFORMATION
GOLD Project ID
Gp0006321  
Project Name
Parageobacillus thermoglucosidasius C56-YS93  
Other Names
Geobacillus thermoglucosidasius C56-YS93  
Legacy ER Project ID
15935  
Legacy GOLD ID
Gi06509, Gc01858  
NCBI BioProject Name Geobacillus thermoglucosidasius C56-YS93
NCBI BioProject ID 40781
NCBI BioProject Accession PRJNA40781
NCBI Locus Tag
Geoth  
NCBI BioSample Accession SAMN02232024
PI David Mead
Added By Nikos Kyrpides on 2009-10-01
Last Modified By Mahrukh Mujeeb on 2017-07-06
Project Comments
  
Project Status
Complete and Published  
Project Relevance Bioenergy
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Geobacillus thermoglucosidasius C56-YS93 genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Publication
Database
  
Genome Publications Standards in genomic sciences Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park.
Other Publications
  
PROJECT COMPOSITION
Study Novel Microbial Enzymes
Analysis Projects Parageobacillus thermoglucosidasius C56-YS93
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
GHFB WGS Single random genomic  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
44  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0006321
Organism Name
Parageobacillus thermoglucosidasius C56-YS93  
Other names (alias, synonyms, short names, common names)
Geobacillus thermoglucosidasius C56-YS93  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Parageobacillus  
Genus Synonyms
Geobacillus  
Species
Parageobacillus thermoglucosidasius  
Subspecies
  
Species Synonyms
  
Strain
C56-YS93  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 634956
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Parageobacillus  
NCBI Species
Parageobacillus thermoglucosidasius  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
55 - 65  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Hot spring
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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