PROJECT INFORMATION
GOLD Project ID
Gp0006054  
Project Name
Vibrio antiquarius Ex25  
Other Names
  
Legacy ER Project ID
15897  
Legacy GOLD ID
Gi05320, Gc01137  
NCBI BioProject Name Vibrio sp. Ex25
NCBI BioProject ID 40507
NCBI BioProject Accession PRJNA40507
NCBI Locus Tag
VEA  
NCBI BioSample Accession SAMN02603570
PI
Added By Nikos Kyrpides on 2009-09-23
Last Modified By Alejandro Rodriguez Mojica on 2018-07-27
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Los Alamos National Laboratory (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
samples taken from a deep-sea hydrothermal vent community along the East Pacific Rise  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Vibrio antiquarius Ex25
Analysis Projects Vibrio antiquarius Ex25
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
2  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0006054
Organism Name
Vibrio antiquarius Ex25  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Vibrio  
Genus Synonyms
  
Species
Vibrio antiquarius  
Subspecies
  
Species Synonyms
  
Strain
Ex25  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 150340
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Vibrio  
NCBI Species
Vibrio antiquarius  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
20 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Marine
Hot spring
Aquatic
Hydrothermal vent
Metabolisms
  
Phenotypes Bioluminescent
Energy Sources Heterotroph

 

 

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