PROJECT NAME
GOLD Project ID
Gp0006052  
Project Name
Photobacterium damselae damselae CIP 102761  
Other Names
  
Legacy ER Project ID
15888  
Legacy GOLD ID
Gi05311  
NCBI BioProject Name Photobacterium damselae subsp. damselae CIP 102761
NCBI BioProject ID 40485
NCBI BioProject Accession
PRJNA40485  
NCBI Locus Tag
VDA  
NCBI BioSample Accession
SAMN02393816  
PI Vonstein,V.
Added By Nikos Kyrpides on 2009-09-22
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Los Alamos National Laboratory (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
pathogen of fish and occasionally humans  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Photobacterium damselae damselae CIP 102761
Analysis Projects Photobacterium damselae damselae CIP 102761
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006052
Organism Name
Photobacterium damselae damselae CIP 102761  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Photobacterium  
Genus Synonyms
  
Species
Photobacterium damselae  
Subspecies
damselae  
Species Synonyms
  
Strain
CIP 102761  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 33539  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2963  
Exemplar Name
Photobacterium damselae  
Taxon DOI
10.1601/tx.10945  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 675817
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Vibrionales  
NCBI Family
Vibrionaceae  
NCBI Genus
Photobacterium  
NCBI Species
Photobacterium damselae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID X74700
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Marine
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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