PROJECT INFORMATION
GOLD Project ID
Gp0006045  
Project Name
Granulicella mallensis MP5ACTX8  
Other Names
  
Legacy ER Project ID
512  
Legacy GOLD ID
Gi05573, Gc02349  
NCBI BioProject Name Acidobacterium sp. MP5ACTX8
NCBI BioProject ID 47903
NCBI BioProject Accession PRJNA47903
NCBI Locus Tag
ACIX8  
NCBI BioSample Accession SAMN02232025
PI Max M. Haggblom
Added By Nikos Kyrpides on 2009-11-08
Last Modified By Tatiparthi Reddy on 2017-10-25
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Rutgers University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Acidobacterium sp. MP5ACTX8 genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Standards in genomic sciences 9(1):71-82 Complete genome sequence of Granulicella mallensis type strain MP5ACTX8(T), an acidobacterium from tundra soil.
Other Publications
  
PROJECT COMPOSITION
Study Whole genome sequencing, assembly and initial annotation of Acidobacterium species from Arctic tundra soils
Analysis Projects Granulicella mallensis MP5ACTX8
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
58  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0006045
Organism Name
Granulicella mallensis MP5ACTX8  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACIDOBACTERIA  
Genus
Granulicella  
Genus Synonyms
Acidobacterium  
Species
Granulicella mallensis  
Subspecies
  
Species Synonyms
  
Strain
MP5ACTX8  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-1857  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.23359  
Exemplar Name
Granulicella mallensis MP5ACTX8  
Taxon DOI
10.1601/tx.23359  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 682795
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Acidobacteria  
NCBI Class
Acidobacteriia  
NCBI Order
Acidobacteriales  
NCBI Family
Acidobacteriaceae  
NCBI Genus
Granulicella  
NCBI Species
Granulicella mallensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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