PROJECT NAME
GOLD Project ID
Gp0005997  
Project Name
Methylobacterium marinus A45  
Other Names
  
Legacy ER Project ID
16139  
Legacy GOLD ID
Gi05568  
NCBI BioProject Name Methylobacter marinus A45
NCBI BioProject ID 157067
NCBI BioProject Accession
PRJNA157067  
NCBI Locus Tag
METMA  
NCBI BioSample Accession
SAMN02261244  
PI Lisa Stein
Added By Nikos Kyrpides on 2009-11-08
Last Modified By Michelle Isbandi on 2016-04-07
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biotechnological
Methanol production
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Methylobacter marinus A45 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Genome announcements Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Whole Genome Sequencing of Methanotrophic Bacteria from Diverse Environments
Analysis Projects Methylobacterium marinus A45
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
4988792  
Vector
  
GC Percent
53  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0005997
Organism Name
Methylobacterium marinus A45  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Methylobacterium  
Genus Synonyms
  
Species
Methylobacterium marinus  
Subspecies
  
Species Synonyms
  
Strain
A45  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2415  
Exemplar Name
Methylobacter marinus  
Taxon DOI
10.1601/tx.2415  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 674036
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Methylococcales  
NCBI Family
Methylococcaceae  
NCBI Genus
Methylobacter  
NCBI Species
Methylobacter marinus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF304197
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
25 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources Methylotroph

 

 

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