PROJECT INFORMATION
GOLD Project ID
Gp0005937  
Project Name
Buchnera aphidicola Ct  
Other Names
  
Legacy ER Project ID
16214  
Legacy GOLD ID
Gi05644, Gc01809  
NCBI BioProject Name Buchnera aphidicola (Cinara tujafilina)
NCBI BioProject ID 41379
NCBI BioProject Accession PRJNA41379
NCBI Locus Tag
BCTU  
NCBI BioSample Accession
PI Amparo Latorre
Added By Nikos Kyrpides on 2009-11-25
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Biotechnological
Sequencing Center GATC-Biotech AG, Konstanz, Germany (Germany)
Collaborating Institute University of Valencia (Spain)
Funding Agency
  
Project Description
Buchnera aphidicola (Cinara tujafilina)genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Database
  
Genome Publications Applied and environmental microbiology 77(13):4446-54 New clues about the evolutionary history of metabolic losses in bacterial endosymbionts, provided by the genome of Buchnera aphidicola from the aphid Cinara tujafilina.
Other Publications
  
PROJECT COMPOSITION
Study Buchnera aphidicola Ct
Analysis Projects Buchnera aphidicola Ct
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
23  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0005937
Organism Name
Buchnera aphidicola Ct  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Buchnera  
Genus Synonyms
  
Species
Buchnera aphidicola  
Subspecies
  
Species Synonyms
  
Strain
Ct  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Eukaryotic symbiont  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 261317
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Erwiniaceae  
NCBI Genus
Buchnera  
NCBI Species
Buchnera aphidicola  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
3 um  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Cinara tujafilina  
Symbiont Taxon ID
7029  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Insect endosymbiont
Endosymbiont
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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