PROJECT INFORMATION | |
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GOLD Project ID
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Gp0005928
|
Project Name
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Brucella pinnipedialis B2/94
|
Other Names
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Legacy ER Project ID
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16181
|
Legacy GOLD ID
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Gi05606, Gc01901
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NCBI BioProject Name | Brucella pinnipedialis B2/94 |
NCBI BioProject ID
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41867 |
NCBI BioProject Accession
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PRJNA41867 |
NCBI Locus Tag
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BPI
|
NCBI BioSample Accession
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|
PI | Zygmunt,M.S. |
Added By |
Nikos Kyrpides
on 2009-11-23 |
Last Modified By |
JGI automated process
on 2014-05-20 |
Project Comments |
|
Project Status
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Complete and Published
|
Project Relevance
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Mammal Pathogen Biothreat Human Pathogen Medical |
Sequencing Center
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National Institute for Agricultural Research (INRA)
(France)
|
Collaborating Institute
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|
Funding Agency
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|
Project Description
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Brucella pinnipedialis B2/94 Genome sequencing
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
Project Information
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|
Database
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Genome Publications
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BMC evolutionary biology
11(200):200
The genome sequence of Brucella pinnipedialis B2/94 sheds light on the evolutionary history of the genus Brucella.
|
Other Publications
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PROJECT COMPOSITION | |
Study |
Brucella pinnipedialis B2/94 |
Organism |
Brucella pinnipedialis B2/94 |
Analysis Projects |
Brucella pinnipedialis B2/94 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Sequencing Comments
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Sequencing Technology
(MIGS-29)
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Library Method
(MIGS-28)
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Number Of Reads
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Read Size
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Vector
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|
GC Percent |
57
|
Chromosome Count |
2
|
Plasmid Count |
0
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0005928 |
Organism Name |
Brucella pinnipedialis B2/94
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
PROTEOBACTERIA-ALPHA
|
Genus |
Brucella
|
Genus Synonyms |
|
Species |
Brucella pinnipedialis
|
Subspecies |
|
Species Synonyms |
|
Strain |
B2/94
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
NCTC 12890
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.11520
|
Exemplar Name |
Brucella pinnipedialis
|
Taxon DOI |
10.1601/tx.11520
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
520461 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Proteobacteria
|
NCBI Class |
Alphaproteobacteria
|
NCBI Order |
Rhizobiales
|
NCBI Family |
Brucellaceae
|
NCBI Genus |
Brucella
|
NCBI Species |
Brucella pinnipedialis
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Mammals
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
AM158981 |
GENERAL PROPERTIES | |
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Oxygen Requirement |
Aerobe
|
Cell Shape |
Rod-shaped
|
Motility |
Nonmotile
|
Sporulation |
Nonsporulating
|
Temperature Range |
Mesophile
|
Temperature Optimum |
37
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
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Symbiotic Relationship |
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Symbiont Name |
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Symbiont Taxon ID |
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Cell Arrangements |
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Diseases |
Brucellosis |
Known Habitats |
Host |
Metabolisms |
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Phenotypes |
Intracellular pathogen Pathogen |
Energy Sources |
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