PROJECT NAME
GOLD Project ID
Gp0005914  
Project Name
Pseudomonas agarici NCPPB 2289  
Other Names
  
Legacy ER Project ID
16168  
Legacy GOLD ID
Gi05591  
NCBI BioProject Name Pseudomonas agarici NCPPB 2289
NCBI BioProject ID 41633
NCBI BioProject Accession
PRJNA41633  
NCBI Locus Tag
PAGAR  
NCBI BioSample Accession
SAMN02471740  
PI
Added By Nikos Kyrpides on 2009-11-16
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Human Pathogen
Medical
Sequencing Center
  
Collaborating Institute The Sainsbury Laboratory (United Kingdom)
Funding Agency
  
Project Description
Pseudomonas agarici NCPPB 2289 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Pseudomonas agarici NCPPB 2289
Analysis Projects Pseudomonas agarici NCPPB 2289
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
59  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0005914
Organism Name
Pseudomonas agarici NCPPB 2289  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas agarici  
Subspecies
  
Species Synonyms
  
Strain
NCPPB 2289  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NCPPB 2289  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2556  
Exemplar Name
Pseudomonas agarici  
Taxon DOI
10.1601/tx.2556  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 690598
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas agarici  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fungi  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Agaricus bisporus  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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