PROJECT INFORMATION
GOLD Project ID
Gp0005871  
Project Name
Riemerella anatipestifer RA-GD  
Other Names
  
Legacy ER Project ID
16118  
Legacy GOLD ID
Gi05542, Gc01683  
NCBI BioProject Name Riemerella anatipestifer RA-GD
NCBI BioProject ID 49039
NCBI BioProject Accession PRJNA49039
NCBI Locus Tag
RIA  
NCBI BioSample Accession
PI Cai,J
Added By Nikos Kyrpides on 2009-11-02
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Riemerella anatipestifer genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 193(11):2896-7 Complete genome sequence of the pathogenic bacterium Riemerella anatipestifer strain RA-GD.
Other Publications
  
PROJECT COMPOSITION
Study Riemerella anatipestifer RA-GD
Analysis Projects Riemerella anatipestifer RA-GD
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0005871
Organism Name
Riemerella anatipestifer RA-GD  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Riemerella  
Genus Synonyms
  
Species
Riemerella anatipestifer  
Subspecies
  
Species Synonyms
  
Strain
RA-GD  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 992406
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Riemerella  
NCBI Species
Riemerella anatipestifer  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Septicemia
Known Habitats
  
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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