PROJECT NAME
GOLD Project ID
Gp0005867  
Project Name
Phycisphaera mikurensis NBRC 102666  
Other Names
  
Legacy ER Project ID
502  
Legacy GOLD ID
Gi05528, Gc02192  
NCBI BioProject Name Phycisphaera mikurensis NBRC 102666
NCBI BioProject ID 82987
NCBI BioProject Accession
PRJDB46  
NCBI Locus Tag
PSMK  
NCBI BioSample Accession
  
PI
Added By Nikos Kyrpides on 2009-11-01
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Tree of Life
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Phycisphaera mikurensis belongs to phylum Planctomyces, and the first cultivable isolate of uncultured planctomycete group. Genome sequence of Phycisphaera mikurensis would provide an insight into the life cycle of Planctomyces  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Phycisphaera mikurensis FYK2301M01
Analysis Projects Phycisphaera mikurensis NBRC 102666
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
73  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0005867
Organism Name
Phycisphaera mikurensis NBRC 102666  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PLANCTOMYCETES  
Genus
Phycisphaera  
Genus Synonyms
  
Species
Phycisphaera mikurensis  
Subspecies
  
Species Synonyms
  
Strain
FYK2301M01  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NBRC 102666  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.15016  
Exemplar Name
Phycisphaera mikurensis  
Taxon DOI
10.1601/tx.15016  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1142394
NCBI Kingdom
  
NCBI Phylum
Planctomycetes  
NCBI Class
Phycisphaerae  
NCBI Order
Phycisphaerales  
NCBI Family
Phycisphaeraceae  
NCBI Genus
Phycisphaera  
NCBI Species
Phycisphaera mikurensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Algae  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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