PROJECT NAME
GOLD Project ID
Gp0005238  
Project Name
Pediococcus claussenii P06, ATCC BAA-344  
Other Names
  
Legacy ER Project ID
15409  
Legacy GOLD ID
Gi04871, Gc02055  
NCBI BioProject Name Pediococcus claussenii ATCC BAA-344
NCBI BioProject ID 42741
NCBI BioProject Accession
PRJNA42741  
NCBI Locus Tag
PECL  
NCBI BioSample Accession
  
PI Barry Ziola
Added By Nikos Kyrpides on 2009-08-17
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center
  
Collaborating Institute University of Saskatchewan (Canada)
Funding Agency
  
Project Description
brewery isolate which has a ropy phenotype  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bacteriology 194(5):1271-2 Complete genome sequence of the beer spoilage organism Pediococcus claussenii ATCC BAA-344T.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Pediococcus claussenii P06, ATCC BAA-344
Analysis Projects Pediococcus claussenii P06, ATCC BAA-344
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
8  
ORGANISM NAME
GOLD Organism ID Go0005238
Organism Name
Pediococcus claussenii P06, ATCC BAA-344  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Pediococcus  
Genus Synonyms
  
Species
Pediococcus claussenii  
Subspecies
  
Species Synonyms
  
Strain
P06, ATCC BAA-344  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-344  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5452  
Exemplar Name
Pediococcus claussenii  
Taxon DOI
10.1601/tx.5452  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 701521
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Pediococcus  
NCBI Species
Pediococcus claussenii  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF404716
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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