PROJECT NAME
GOLD Project ID
Gp0005159  
Project Name
Thermaerobacter subterraneus C21, DSM 13965  
Other Names
  
Legacy ER Project ID
14887  
Legacy GOLD ID
Gi04367  
NCBI BioProject Name Thermaerobacter subterraneus DSM 13965
NCBI BioProject ID 50747
NCBI BioProject Accession
PRJNA50747  
NCBI Locus Tag
Thesu  
NCBI BioSample Accession
SAMN00116773  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-05-30
Last Modified By Supratim Mukherjee on 2016-02-04
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Thermaerobacter subterraneus DSM 13965 genome sequencing project.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
GEBA
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Thermaerobacter subterraneus C21, DSM 13965
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
72  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0005159
Organism Name
Thermaerobacter subterraneus C21, DSM 13965  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Thermaerobacter  
Genus Synonyms
  
Species
Thermaerobacter subterraneus  
Subspecies
  
Species Synonyms
  
Strain
C21, DSM 13965  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 13965  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4501  
Exemplar Name
Thermaerobacter subterraneus  
Taxon DOI
10.1601/tx.4501  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 867903
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiales Family XVII. Incertae Sedis  
NCBI Genus
Thermaerobacter  
NCBI Species
Thermaerobacter subterraneus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Sediment  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF343566
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate aerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Temperature Optimum
70  
Salinity
  
pH
8.5  
Cell Diameter
0.3um  
Cell Length
2-10um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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