PROJECT NAME
GOLD Project ID
Gp0005158  
Project Name
Pseudothermotoga thermarum DSM 5069  
Other Names
  
Legacy ER Project ID
14885  
Legacy GOLD ID
Gi04365, Gc01826  
NCBI BioProject Name Pseudothermotoga thermarum DSM 5069
NCBI BioProject ID 41517
NCBI BioProject Accession
PRJNA41517  
NCBI Locus Tag
Theth  
NCBI BioSample Accession
SAMN02232059  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-05-30
Last Modified By Jyothi Mallajosyula on 2015-02-25
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Thermotoga thermarum DSM 5069 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Pseudothermotoga thermarum DSM 5069
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
40  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0005158
Organism Name
Pseudothermotoga thermarum DSM 5069  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
THERMOTOGAE  
Genus
Pseudothermotoga  
Genus Synonyms
  
Species
Pseudothermotoga thermarum  
Subspecies
  
Species Synonyms
  
Strain
DSM 5069  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 5069  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.468  
Exemplar Name
Pseudothermotoga thermarum DSM 5069  
Taxon DOI
10.1601/tx.25056  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 688269
NCBI Kingdom
  
NCBI Phylum
Thermotogae  
NCBI Class
Thermotogae  
NCBI Order
Thermotogales  
NCBI Family
Thermotogaceae  
NCBI Genus
Pseudothermotoga  
NCBI Species
Pseudothermotoga thermarum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Volcanic  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB039769
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Hyperthermophile  
Temperature Optimum
80  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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