PROJECT NAME
GOLD Project ID
Gp0005129  
Project Name
Zunongwangia profunda SM-A87  
Other Names
  
Legacy ER Project ID
393  
Legacy GOLD ID
Gi04483, Gc01265  
NCBI BioProject Name Zunongwangia profunda SM-A87
NCBI BioProject ID 38641
NCBI BioProject Accession
PRJNA38641  
NCBI Locus Tag
ZPR  
NCBI BioSample Accession
  
PI Yu-Zhong Zhang
Added By Nikos Kyrpides on 2009-07-06 00:00:00.0
Last Modified By Auto script update processes on 2014-08-18 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Comparative analysis
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute
  
Funding Agency
  
Project Description
http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genome&Cmd=Retrieve&dopt=Protein+Table&list_uids=26012  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics 11(247):247 The complete genome of Zunongwangia profunda SM-A87 reveals its adaptation to the deep-sea environment and ecological role in sedimentary organic nitrogen degradation.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Zunongwangia profunda SM-A87
Analysis Projects Zunongwangia profunda SM-A87
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0005129
Organism Name
Zunongwangia profunda SM-A87  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Zunongwangia  
Genus Synonyms
  
Species
Zunongwangia profunda  
Subspecies
  
Species Synonyms
  
Strain
SM-A87  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 18752  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.11189  
Exemplar Name
Zunongwangia profunda  
Taxon DOI
10.1601/tx.11189  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 655815
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Zunongwangia  
NCBI Species
Zunongwangia profunda  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 720960
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
Orange  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Deep sea
Marine
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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