PROJECT INFORMATION
GOLD Project ID
Gp0005092  
Project Name
Desulfobacula toluolica Tol2  
Other Names
  
Legacy ER Project ID
366  
Legacy GOLD ID
Gi04447, Gc0000366  
NCBI BioProject Name Desulfobacula toluolica Tol2
NCBI BioProject ID 38433
NCBI BioProject Accession PRJEA38433
NCBI Locus Tag
TOL2  
NCBI BioSample Accession
PI
Added By Nikos Kyrpides on 2009-06-14
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Max Planck Institute (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Desulfobacula toluolica Tol2 genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Environmental microbiology 15(5):1334-55 Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium.
Other Publications
  
PROJECT COMPOSITION
Study Desulfobacula toluolica Tol2
Analysis Projects Desulfobacula toluolica Tol2
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0005092
Organism Name
Desulfobacula toluolica Tol2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfobacula  
Genus Synonyms
  
Species
Desulfobacula toluolica  
Subspecies
  
Species Synonyms
  
Strain
Tol2, DSM 7467  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 7467  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3561  
Exemplar Name
Desulfobacula toluolica  
Taxon DOI
10.1601/tx.3561  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 651182
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfobacterales  
NCBI Family
Desulfobacteraceae  
NCBI Genus
Desulfobacula  
NCBI Species
Desulfobacula toluolica  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID X70953
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Mud
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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