PROJECT INFORMATION
GOLD Project ID
Gp0005068  
Project Name
Halothece sp. PCC 7418  
Other Names
  
Legacy ER Project ID
14831  
Legacy GOLD ID
Gi04309, Gc02430  
NCBI BioProject Name Cyanothece sp. PCC 7418
NCBI BioProject ID 40817
NCBI BioProject Accession PRJNA40817
NCBI Locus Tag
PCC7418  
NCBI BioSample Accession SAMN02232029
PI Cheryl Kerfeld
Added By Cheryl Kerfeld on 2009-05-08
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Tree of Life
GEBA-PCC
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Cyanothece sp. PCC 7418 genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 110(3):1053-8 Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing.
Other Publications
  
PROJECT COMPOSITION
Study GEBA-PCC
Analysis Projects Halothece sp. PCC 7418
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
454
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
43  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0005068
Organism Name
Halothece sp. PCC 7418  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Halothece  
Genus Synonyms
  
Species
Halothece sp. PCC 7418  
Subspecies
  
Species Synonyms
  
Strain
PCC 7418  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
PCC 7418  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 65093
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Chroococcales  
NCBI Family
Aphanothecaceae  
NCBI Genus
Halothece  
NCBI Species
Halothece sp. PCC 7418  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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