PROJECT NAME
GOLD Project ID
Gp0005063  
Project Name
Erwinia pyrifoliae DSM 12163  
Other Names
  
Legacy ER Project ID
14821  
Legacy GOLD ID
Gi04299, Gc01168  
NCBI BioProject Name Erwinia pyrifoliae DSM 12163
NCBI BioProject ID 37877
NCBI BioProject Accession
PRJEA37877  
NCBI Locus Tag
EPYR  
NCBI BioSample Accession
  
PI Brion Duffy
Added By Nikos Kyrpides on 2009-05-07
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Comparative analysis
Sequencing Center Agroscope (Switzerland)
Collaborating Institute
  
Funding Agency
  
Project Description
newly described necrotrophic pathogen, which causes fire blight on Asian (Nashi) pear and is geographically restricted to Eastern Asia  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Database
  
Genome Publications BMC genomics 11(2):2 Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Erwinia pyrifoliae DSM 12163
Analysis Projects Erwinia pyrifoliae DSM 12163
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Illumina
Library Method (MIGS-28)
  
Number Of Reads
533966 454-FLX, 4835468 Illumina 35bps  
Read Size
  
Vector
  
GC Percent
53  
Chromosome Count
1  
Plasmid Count
4  
ORGANISM NAME
GOLD Organism ID Go0005063
Organism Name
Erwinia pyrifoliae DSM 12163  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Erwinia  
Genus Synonyms
  
Species
Erwinia pyrifoliae  
Subspecies
  
Species Synonyms
  
Strain
Ep16/96  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12163  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3190  
Exemplar Name
Erwinia pyrifoliae  
Taxon DOI
10.1601/tx.3190  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 644651
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Erwinia  
NCBI Species
Erwinia pyrifoliae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 163046
Genbank 16S ID AJ009930:{1-1529}
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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