PROJECT NAME
GOLD Project ID
Gp0004925  
Project Name
Deinococcus maricopensis LB-34, DSM 21211  
Other Names
  
Legacy ER Project ID
14692  
Legacy GOLD ID
Gi04181, Gc01597  
NCBI BioProject Name Deinococcus maricopensis DSM 21211
NCBI BioProject ID 43461
NCBI BioProject Accession
PRJNA43461  
NCBI Locus Tag
Deima  
NCBI BioSample Accession
SAMN00713579  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-03-15
Last Modified By Jyothi Mallajosyula on 2014-08-04
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Deinococcus maricopensis DSM 21211 genome sequencing project.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
Database DOE Joint Genome Institute
Genome Publications Standards in genomic sciences 4(2):163-72 Complete genome sequence of Deinococcus maricopensis type strain (LB-34).
Other Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Deinococcus maricopensis LB-34, DSM 21211
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
70  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004925
Organism Name
Deinococcus maricopensis LB-34, DSM 21211  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Deinococcus  
Genus Synonyms
  
Species
Deinococcus maricopensis  
Subspecies
  
Species Synonyms
  
Strain
LB-34, DSM 21211  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 21211  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9677  
Exemplar Name
Deinococcus maricopensis  
Taxon DOI
10.1601/tx.9677  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 709986
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Deinococcales  
NCBI Family
Deinococcaceae  
NCBI Genus
Deinococcus  
NCBI Species
Deinococcus maricopensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Desert  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY743274
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
40  
Salinity
  
pH
  
Cell Diameter
2 um  
Cell Length
6 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes Radiation resistant
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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