PROJECT NAME
GOLD Project ID
Gp0004919  
Project Name
Corynebacterium aurimucosum CN-1, ATCC 700975  
Other Names
  
Legacy ER Project ID
14814  
Legacy GOLD ID
Gc00991  
NCBI BioProject Name Corynebacterium aurimucosum ATCC 700975
NCBI BioProject ID 37279
NCBI BioProject Accession
PRJNA37279  
NCBI Locus Tag
cauri  
NCBI BioSample Accession
SAMN02603064  
PI Andreas Tauch
Added By Nikos Kyrpides on 2009-05-01
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Comparative analysis
Medical
Sequencing Center
  
Collaborating Institute Bielefeld University (Germany)
Funding Agency
  
Project Description
Corynebacterium aurimucosum ATCC 700975 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications BMC genomics 11(91):91 Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Corynebacterium aurimucosum CN-1, ATCC 700975
Analysis Projects Corynebacterium aurimucosum CN-1, ATCC 700975
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Sanger
Library Method (MIGS-28)
  
Number Of Reads
594627 (FLX), 215 (Sanger)  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0004919
Organism Name
Corynebacterium aurimucosum CN-1, ATCC 700975  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Corynebacterium  
Genus Synonyms
  
Species
Corynebacterium aurimucosum  
Subspecies
  
Species Synonyms
nigricans  
Strain
CN-1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 700975  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.6250  
Exemplar Name
Corynebacterium nigricans  
Taxon DOI
10.1601/tx.6250  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 548476
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Corynebacteriaceae  
NCBI Genus
Corynebacterium  
NCBI Species
Corynebacterium aurimucosum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Reproductive system  
Ecosystem Subtype
Vagina  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 355797
Genbank 16S ID
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Opportunistic infection
Known Habitats Host
Human vaginal microflora
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?